DNAscope LongRead PacBio Pipeline

  • PrecisionFDA awarded pipeline for HiFi SNP/Indel/SV detection;
  • Highest accuracy: F1 Score SNP&Indel 99.9%;
  • Processing speed 6x faster than DeepVariant;

Preprint Co-drafted by Sentieon and PacBio Team in 2022

Click to access: https://doi.org/10.1101/2022.06.01.494452

High Accuracy Short Variants Calling

High Accuracy Structural Variants Calling

haplotype-resolved single base resolution SV caller

Sentieon DNAscope LongReadSV works well with PacBio HiFi reads at different mean-read lengths. It’s designed to perform haplotype-resolved single base-resolution SV calling and shows superior accuracy against known truth set.

Rapid Turnaround Time

Source: DNAnexus Benchmark – An exploration of machine-learning based variant callers for SNV and small-indel using PacBio HiFi data
Click here – search publications applying DNAscope on PacBio datasets

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